PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UV8L7
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 447aa    MW: 50713.4 Da    PI: 5.8693
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UV8L7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12271316454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +h e+Er+RR+++N++f  Lr ++P+       +++Ka+ L  Av YI++L
  Aradu.UV8L7 271 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVAYINEL 316
                  799***********************6.....4***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.7E-412153IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474594.06E-17267333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.71267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.41E-14270321No hitNo description
PfamPF000106.1E-10271316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-17271333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-15273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MLQQNLQFLL QSQPSWWVYA IFWSTTKDDN GNLYLAWGEG HFQGNTTEHT KTQQQHNQND  60
AEWFYVMSLT RTFSIANSSS SSLPGKAFAL GSVLWLNSKE ELQFYNCERA KEAHAHGIET  120
LICIPTSNGV VEMGSYNTIP QNWNLINHVK SVFEDSMVNN NNNNNNNNHC NNNNLHNTVQ  180
QIFEDNDDFS FAEISFMAGL EEGREQVISR KQADVTVAFN KESKDSYAES EHSDSDCPFL  240
KTENTENKNK SEAPKSKRGR KPVLNRETPV NHVEAERQRR EKLNHRFYAL RAVVPNVSRM  300
DKASLLSDAV AYINELKAKI KDLESEKDNY QRKKKVKLET GDTMDNQSTV TNSSTVVDQE  360
KCSNGVVAEV DVKIIGDDAM VRVQSENVNH PGARLMGVLR DMEFQVHHAS MTCVNELMLQ  420
DVVGKVPNGI FTSEEGIRSA ILMRLDH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A9e-2321539192Transcription factor MYC3
4rqw_B9e-2321539192Transcription factor MYC3
4rs9_A9e-2321539192Transcription factor MYC3
4yz6_A9e-2321539192Transcription factor MYC3
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ0992790.0DQ099279.1 Arachis hypogaea clone Ah-331 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015947924.10.0PREDICTED: transcription factor bHLH14
TrEMBLA0A0L9VR061e-180A0A0L9VR06_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SYR31e-179A0A0S3SYR3_PHAAN; Uncharacterized protein
STRINGGLYMA16G02320.21e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84134116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.11e-57bHLH family protein